STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2018PFAM: phosphoribosyltransferase; dienelactone hydrolase; KEGG: mbo:Mb0586c hypothetical protein. (406 aa)    
Predicted Functional Partners:
Noca_4235
PFAM: heat shock protein Hsp20; KEGG: rha:RHA1_ro08348 heat shock protein (18 KDa antigen-like protein); Belongs to the small heat shock protein (HSP20) family.
 
  
 0.656
Noca_3989
Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.638
Noca_2637
PFAM: peptidase M50; KEGG: tfu:Tfu_1815 hypothetical protein; Belongs to the peptidase M50B family.
 
  
 0.580
Noca_0998
TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: ade:Adeh_0468 cation transporting P-type ATPase.
 
  
 0.579
Noca_0994
PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: tfu:Tfu_3046 GAF:ATP-binding region, ATPase-like.
 
    0.523
Noca_3183
PFAM: PfkB domain protein; KEGG: nfa:nfa28550 putative fructose-1-phosphate kinase; Belongs to the carbohydrate kinase PfkB family.
  
  
 0.515
Noca_2017
PFAM: ribonuclease II; KEGG: sma:SAV5880 ribonuclease R.
       0.476
Noca_3638
KEGG: pac:PPA1185 putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation).
  
  
 0.471
Noca_1965
PFAM: protein of unknown function DUF72; KEGG: rha:RHA1_ro02437 hypothetical protein.
 
     0.465
Noca_0946
PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: sco:SCO0203 two-component sensor.
  
    0.456
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.