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Noca_2020 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2020" - ABC transporter-like protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2020ABC transporter-like protein (353 aa)    
Predicted Functional Partners:
Noca_2021
Binding-protein-dependent transport system inner membrane protein (522 aa)
 
  0.997
Noca_2022
Extracellular solute-binding protein (333 aa)
 
 
  0.997
Noca_3227
Binding-protein-dependent transport system inner membrane protein (290 aa)
  0.945
Noca_3226
Binding-protein-dependent transport system inner membrane protein (289 aa)
 
 
  0.938
Noca_3215
Binding-protein-dependent transport system inner membrane protein (282 aa)
 
  0.938
Noca_2019
AMP-dependent synthetase and ligase (841 aa)
 
          0.891
Noca_3214
Binding-protein-dependent transport systems inner membrane component (278 aa)
 
 
    0.854
Noca_3229
Extracellular solute-binding protein (408 aa)
 
 
  0.807
Noca_0539
Sulfate ABC transporter, inner membrane subunit CysT (293 aa)
   
  0.756
Noca_3216
Extracellular solute-binding protein (405 aa)
 
 
    0.753
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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