STRINGSTRING
Noca_2023 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2023" - Amidinotransferase family protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2023Amidinotransferase family protein (362 aa)    
Predicted Functional Partners:
Noca_2022
Extracellular solute-binding protein (333 aa)
              0.638
Noca_2021
Binding-protein-dependent transport system inner membrane protein (522 aa)
              0.632
Noca_2020
ABC transporter-like protein (353 aa)
              0.632
Noca_2019
AMP-dependent synthetase and ligase (841 aa)
              0.632
Noca_4491
Amidohydrolase 3 (508 aa)
   
          0.515
Noca_0408
Thrombospondin type 3 repeat-containing protein (802 aa)
   
          0.436
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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