Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Noca_2032PFAM: transposase IS3/IS911 family protein; KEGG: cef:CE2618 putative transposase. (106 aa)    
Predicted Functional Partners:
Noca_2029
Hypothetical protein; KEGG: cef:CE2619 putative transposase.
 
  
 0.793
Noca_2753
PFAM: Integrase, catalytic region; KEGG: cef:CE2619 putative transposase.
 
  
 0.556
Noca_1592
PFAM: Integrase, catalytic region; KEGG: cef:CE2619 putative transposase.
 
  
 0.544
Noca_3565
PFAM: Integrase, catalytic region; KEGG: cef:CE2619 putative transposase.
 
  
 0.544
Noca_2033
KEGG: sco:SCO7806 DNA-binding protein.
       0.538
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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