STRINGSTRING
Noca_2041 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2041" - Glucose sorbosone dehydrogenase in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2041Glucose sorbosone dehydrogenase (387 aa)    
Predicted Functional Partners:
Noca_2040
Hypothetical protein (418 aa)
   
        0.798
panB
3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is tranferred onto alpha-ketoisovalerate to form ketopantoate (295 aa)
              0.669
Noca_2039
Hypothetical protein (285 aa)
              0.652
Noca_0428
Beta-lactamase domain-containing protein (366 aa)
 
   
    0.542
Noca_2522
Beta-lactamase domain-containing protein (230 aa)
 
   
    0.531
Noca_2043
Type 11 methyltransferase (249 aa)
              0.480
Noca_3650
Beta-lactamase domain-containing protein (207 aa)
       
    0.469
Noca_2937
Beta-lactamase domain-containing protein (452 aa)
       
    0.469
Noca_2930
Beta-lactamase domain-containing protein (378 aa)
       
    0.469
Noca_1902
Beta-lactamase domain-containing protein (287 aa)
       
    0.469
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (9%) [HD]