STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2052PFAM: NADP oxidoreductase, coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: cgb:cg1421 putative dinucleotide-binding enzyme. (191 aa)    
Predicted Functional Partners:
Noca_2054
PFAM: phospholipase/Carboxylesterase; KEGG: nph:NP0926A hypothetical protein.
 
     0.687
Noca_2053
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nfa:nfa20320 hypothetical protein.
 
     0.667
Noca_2051
Transcriptional regulator, MarR family; PFAM: regulatory protein, MarR; KEGG: rha:RHA1_ro01019 probable transcriptional regulator, MarR family.
 
     0.663
Noca_0816
TIGRFAM: NADPH-dependent F420 reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; KEGG: tfu:Tfu_0970 NADPH-dependent F420 reductase.
  
     0.622
Noca_2055
PFAM: Hydratase/decarboxylase; KEGG: mxa:MXAN_0925 putative 4-oxalocrotonate decarboxylase.
       0.598
Noca_2050
PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rha:RHA1_ro11203 response regulator, two-component system.
       0.421
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.