Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Noca_2067PFAM: CDP-alcohol phosphatidyltransferase; KEGG: sco:SCO3457 transmembrane protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (215 aa)    
Predicted Functional Partners:
Noca_2068
KEGG: sco:SCO3456 putative secreted protein.
 
     0.931
Noca_2072
KEGG: sco:SCO3458 integral membrane protein.
 
     0.836
Noca_2069
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cyb:CYB_0132 ABC transporter, permease protein.
 
    0.798
Noca_2070
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sco:SCO3454 putative ABC-transporter membrane protein.
 
    0.788
Noca_2071
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mmc:Mmcs_5124 ABC transporter related; Belongs to the ABC transporter superfamily.
  
    0.710
Noca_2318
KEGG: sma:SAV2509 hypothetical protein.
  
    0.661
Noca_2065
PFAM: glycosyl transferase, group 1; KEGG: rxy:Rxyl_2620 phosphatidyl-myo-inositol alpha-mannosyltransferase.
  
  
 0.449
Noca_2324
PFAM: CinA domain protein; KEGG: fal:FRAAL5732 competence-inducible (CinA-like) protein; Belongs to the CinA family.
  
  
 0.440
folD1
Methenyltetrahydrofolate cyclohydrolase / 5,10-methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
  
  
 0.421
Noca_2066
PFAM: LmbE family protein; KEGG: rha:RHA1_ro02076 possible LmbE-related protein.
       0.421
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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