STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2075PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: mpa:MAP2941c hypothetical protein. (297 aa)    
Predicted Functional Partners:
Noca_2076
PFAM: Redoxin domain protein; KEGG: mbo:Mb1704 probable conserved lipoprotein DsbF.
 
  
 0.968
Noca_2073
Pyridine nucleotide-disulfide oxidoreductase dimerization region; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: sco:SCO3443 putative pyridine nucleotide-disulphide oxidoreductase.
       0.787
Noca_2074
PFAM: protein of unknown function DUF427; KEGG: dge:Dgeo_1745 protein of unknown function DUF427.
       0.773
Noca_0426
PFAM: dihydrodipicolinate reductase; KEGG: rha:RHA1_ro02530 hypothetical protein.
  
     0.521
Noca_2077
PFAM: glutaredoxin; KEGG: sco:SCO3442 hypothetical protein.
       0.470
Noca_1996
Redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sco:SCO2369 thiol-specific antioxidant protein.
  
  
 0.425
Noca_0504
PFAM: cytochrome c assembly protein; KEGG: pac:PPA0328 putative cytochrome c biogenesis protein.
  
  
 0.421
Noca_1955
PFAM: cytochrome c assembly protein; KEGG: dra:DR0348 cytochrome c-type biogenesis protein, heme exporter protein C.
  
  
 0.421
Noca_2200
PFAM: cytochrome c assembly protein; KEGG: fra:Francci3_0513 cytochrome c assembly protein.
  
  
 0.421
Noca_2518
PFAM: Rieske [2Fe-2S] domain protein; KEGG: rha:RHA1_ro04538 ketosteroid-9-alpha-hydroxylase, oxygenase.
  
     0.421
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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