Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Noca_2080Hypothetical protein; KEGG: fra:Francci3_1889 glycoside hydrolase 15-related. (156 aa)    
Predicted Functional Partners:
Noca_2079
PFAM: protein of unknown function DUF81; KEGG: hma:rrnAC2453 hypothetical protein.
       0.773
Noca_3994
Trehalose 6-phosphate synthase; PFAM: glycosyl transferase, family 20; KEGG: pac:PPA0961 alpha,alpha-trehalose-phosphate synthase.
 
   
 0.600
Noca_3989
Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
 
   
 0.546
Noca_2078
PFAM: isochorismatase hydrolase; KEGG: cps:CPS_1616 isochorismatase family protein.
       0.512
Noca_2081
PFAM: DoxX family protein; KEGG: mxa:MXAN_6975 DoxX family protein.
 
     0.447
Noca_3416
PFAM: Berberine/berberine domain protein; KEGG: eba:ebA6736 probable FAD/FMN-containing oxidoreductase.
 
     0.435
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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