STRINGSTRING
Noca_2091 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2091" - Transcriptional regulator in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2091Transcriptional regulator (417 aa)    
Predicted Functional Partners:
Noca_2092
Aldehyde dehydrogenase (507 aa)
 
 
 
  0.898
Noca_3316
Glycerone kinase (333 aa)
   
      0.714
Noca_3315
Dak phosphatase (207 aa)
   
      0.714
Noca_2088
FAD-dependent pyridine nucleotide-disulfide oxidoreductase (484 aa)
         
  0.605
Noca_2090
Sigma-70 region 2 domain-containing protein (187 aa)
         
  0.583
Noca_2089
Hypothetical protein (92 aa)
              0.582
Noca_4454
Dehydrogenase, E1 component (726 aa)
   
   
  0.569
Noca_1791
Hypothetical protein (180 aa)
   
          0.478
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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