STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2104PFAM: OsmC family protein; KEGG: rxy:Rxyl_0142 OsmC-like protein. (146 aa)    
Predicted Functional Partners:
Noca_2103
Hypothetical protein.
       0.773
Noca_2101
PFAM: multicopper oxidase, type 3; KEGG: pac:PPA0092 hypothetical protein.
       0.655
Noca_2102
KEGG: pac:PPA0093 hypothetical membrane protein.
       0.655
Noca_3418
Hypothetical protein.
   
    0.628
Noca_2105
2-oxo-acid dehydrogenase E1 component homodimeric type; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
       0.605
Noca_4568
PFAM: CsbD family protein; KEGG: rha:RHA1_ro04155 hypothetical protein; Belongs to the UPF0337 (CsbD) family.
  
  
 0.593
Noca_3443
TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: aba:Acid345_2316 peptidase C56, PfpI.
 
  
 0.578
Noca_2688
PFAM: aldo/keto reductase; KEGG: sco:SCO7356 oxidoreductase.
  
  
 0.560
Noca_4343
Catalase domain protein; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
 
  
 0.543
Noca_2106
Transcriptional regulator, ArsR family; PFAM: regulatory protein, ArsR; KEGG: rha:RHA1_ro08261 possible transcriptional regulator, MarR family.
       0.496
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.