STRINGSTRING
Noca_2118 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2118" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2118Hypothetical protein (173 aa)    
Predicted Functional Partners:
Noca_2117
Sigma-70 region 2 domain-containing protein (422 aa)
              0.598
Noca_2116
DGPFAETKE family protein (125 aa)
              0.518
Noca_4172
Hypothetical protein (158 aa)
   
          0.473
Noca_1954
Putative lipoprotein (465 aa)
   
          0.469
Noca_0356
Hypothetical protein (125 aa)
   
          0.451
Noca_4384
Putative gualylate cyclase protein (84 aa)
   
          0.438
Noca_2523
Hypothetical protein (242 aa)
   
          0.423
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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