STRINGSTRING
Noca_2124 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2124" - High-affinity nickel-transporter in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2124High-affinity nickel-transporter (347 aa)    
Predicted Functional Partners:
Noca_0534
Trans-hexaprenyltranstransferase (334 aa)
       
      0.635
Noca_1603
Phosphatidylinositol-3-phosphate phosphatase (273 aa)
   
          0.620
Noca_1007
Phosphoesterase (305 aa)
   
          0.607
Noca_3084
Polyprenyl synthetase (358 aa)
       
      0.534
Noca_3200
Phosphoesterase (380 aa)
   
          0.491
Noca_0723
Glycoside hydrolase family protein (362 aa)
   
          0.426
Noca_4608
Na+/solute symporter (547 aa)
   
          0.422
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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