STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2134PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rha:RHA1_ro01381 possible ferredoxin--NAD(+) reductase. (402 aa)    
Predicted Functional Partners:
Noca_2552
PFAM: Rieske [2Fe-2S] domain protein; KEGG: sco:SCO1923 putative dioxygenase ferredoxin subunit.
 
 0.958
Noca_4280
PFAM: Rieske [2Fe-2S] domain protein; KEGG: rha:RHA1_ro04376 probable aromatic ring dioxygenase.
 
 0.957
Noca_0832
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rfr:Rfer_0300 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
  
 
0.919
Noca_3355
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: sco:SCO7117 ferredoxin reductase.
  
  
 
0.917
Noca_4282
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rha:RHA1_ro04374 reductase.
  
  
 
0.916
Noca_2135
PFAM: Rieske [2Fe-2S] domain protein; KEGG: sma:SAV6327 ferredoxin subunit of phenylpropionate dioxygenase.
 
 
 0.912
Noca_0689
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dar:Daro_3244 short-chain dehydrogenase/reductase SDR.
  
 
 0.906
Noca_0122
Alkane 1-monooxygenase; PFAM: Rubredoxin-type Fe(Cys)4 protein; fatty acid desaturase; KEGG: nfa:nfa46180 putative alkane-1-monooxygenase.
 
 
 0.756
Noca_4025
TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: fra:Francci3_0795 nitrite reductase (NAD(P)H) large subunit, NirD.
 
 0.688
Noca_2137
PFAM: Rieske [2Fe-2S] domain protein; KEGG: fal:FRAAL6167 hypothetical protein; putative dioxygenase.
 
   
 0.684
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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