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Noca_2136 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2136" - Short-chain dehydrogenase/reductase SDR in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2136Short-chain dehydrogenase/reductase SDR (274 aa)    
Predicted Functional Partners:
Noca_2139
Hypothetical protein (98 aa)
              0.859
Noca_2138
Class II aldolase/adducin family protein (246 aa)
              0.859
Noca_2137
Rieske (2Fe-2S) domain-containing protein (450 aa)
              0.859
Noca_0689
Short-chain dehydrogenase/reductase SDR (269 aa)
   
          0.766
Noca_2840
Short chain dehydrogenase (302 aa)
   
          0.762
Noca_1849
Short-chain dehydrogenase/reductase SDR (233 aa)
 
          0.762
Noca_4089
Short-chain dehydrogenase/reductase SDR (234 aa)
   
          0.732
Noca_1729
Short chain dehydrogenase (227 aa)
   
          0.698
Noca_0837
Muconolactone delta-isomerase (95 aa)
   
          0.681
Noca_2135
Rieske (2Fe-2S) domain-containing protein (116 aa)
              0.679
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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