STRINGSTRING
Noca_2143 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2143" - Regulatory protein MarR in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2143Regulatory protein MarR (214 aa)    
Predicted Functional Partners:
Noca_3853
Regulatory protein MarR (162 aa)
   
          0.554
Noca_2142
Hypothetical protein (352 aa)
              0.546
Noca_1870
Regulatory protein MarR (158 aa)
   
          0.541
Noca_4366
MarR family transcriptional regulator (165 aa)
   
          0.508
Noca_2141
Alpha/beta hydrolase fold protein (284 aa)
              0.403
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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