Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Noca_2156PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rha:RHA1_ro02936 probable formyl-CoA transferase; Belongs to the CoA-transferase III family. (407 aa)    
Predicted Functional Partners:
Noca_2157
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rxy:Rxyl_0245 enoyl-CoA hydratase/isomerase.
  
 
 0.824
Noca_2158
Formyl-CoA transferase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: nph:NP6182A predicted crotonobetainyl-CoA:carnitine CoA-transferase/alpha-methylacyl-CoA racemase 1; Belongs to the CoA-transferase III family.
 
    
0.809
Noca_2155
D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase domain protein; KEGG: rha:RHA1_ro03236 probable D-lactate dehydrogenase (cytochrome).
  
    0.524
Noca_2160
PFAM: aldehyde dehydrogenase; KEGG: rha:RHA1_ro05333 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
   0.521
Noca_2159
3-hydroxyisobutyrate dehydrogenase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: rpb:RPB_2122 3-hydroxyisobutyrate dehydrogenase.
       0.510
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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