STRINGSTRING
Noca_2175 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2175" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2175Hypothetical protein (284 aa)    
Predicted Functional Partners:
Noca_2176
Helix-turn-helix domain-containing protein (125 aa)
              0.583
Noca_3656
MMPL domain-containing protein (719 aa)
   
          0.504
Noca_4247
MMPL domain-containing protein (726 aa)
   
          0.474
Noca_1296
Major facilitator transporter (406 aa)
   
          0.436
Noca_3454
Hypothetical protein (396 aa)
   
          0.429
Noca_2759
Regulatory protein MarR (140 aa)
   
          0.414
Noca_0144
MMPL domain-containing protein (718 aa)
   
          0.401
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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