STRINGSTRING
Noca_2193 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2193" - DoxX family protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2193DoxX family protein (123 aa)    
Predicted Functional Partners:
Noca_2192
Hypothetical protein (148 aa)
 
          0.765
Noca_2194
Regulatory protein TetR (218 aa)
 
          0.720
Noca_2191
NmrA family protein (210 aa)
 
          0.523
Noca_0354
Bifunctional uroporphyrinogen-III synthetase/response regulator domain-containing protein (372 aa)
   
          0.503
Noca_2250
DNA primase catalytic core (1976 aa)
   
          0.485
Noca_4670
Peptidase S8/S53 subtilisin kexin sedolisin (531 aa)
   
          0.483
Noca_1580
DNA primase catalytic core (1797 aa)
   
          0.482
Noca_1402
Putative glycosyltransferase (659 aa)
   
          0.459
Noca_2694
Serine/threonine protein kinase (422 aa)
   
          0.440
Noca_1454
Hypothetical protein (473 aa)
   
          0.428
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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