STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2203PFAM: Redoxin domain protein; Thioredoxin domain; KEGG: ttj:TTHA1728 cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE. (203 aa)    
Predicted Functional Partners:
Noca_2199
PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: tfu:Tfu_2703 putative cytochrome c biogenesis membrane protein.
 
  
 0.803
lnt
Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.
     
 0.786
Noca_2202
PFAM: Redoxin domain protein; KEGG: tfu:Tfu_2704 hypothetical protein.
 
   
0.730
Noca_2200
PFAM: cytochrome c assembly protein; KEGG: fra:Francci3_0513 cytochrome c assembly protein.
  
  
 0.721
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.710
Noca_1951
PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: ade:Adeh_2146 cytochrome c biogenesis protein.
 
  
 0.696
Noca_0502
PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: sco:SCO4473 putative cytochrome biogenesis related protein.
 
  
 0.667
Noca_1958
PFAM: cytochrome c assembly protein; KEGG: mxa:MXAN_3253 cytochrome c-type biogenesis protein CcmF.
 
  
 0.645
Noca_2201
PFAM: ResB family protein; KEGG: sma:SAV4800 putative cytochrome c biogenesis membrane protein.
  
  
 0.642
Noca_3024
PFAM: electron transport protein SCO1/SenC; KEGG: fra:Francci3_2499 electron transport protein SCO1/SenC.
 
 
 0.592
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.