STRINGSTRING
Noca_2212 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2212" - Putative ABC antibiotics transporter in Nocardioides sp. JS614
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2212Putative ABC antibiotics transporter (528 aa)    
Predicted Functional Partners:
Noca_2211
ABC transporter-like protein (312 aa)
 
    0.986
Noca_1666
Putative ABC antibiotics transporter (548 aa)
   
   
 
0.924
Noca_2559
ABC transporter-like protein (309 aa)
 
    0.904
Noca_1665
ABC transporter-like protein (316 aa)
 
    0.904
Noca_0478
ABC transporter-like protein (249 aa)
 
    0.731
Noca_1482
Daunorubicin resistance ABC transporter ATPase subunit (344 aa)
 
    0.712
Noca_4497
ABC transporter-like protein (314 aa)
 
 
    0.668
Noca_1320
ABC transporter-like protein (300 aa)
 
 
    0.668
Noca_1021
ABC transporter-like protein (298 aa)
 
 
    0.668
Noca_0892
ABC transporter-like protein (302 aa)
 
 
    0.668
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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