Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2216TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: nfa:nfa52310 putative cation transporter. (305 aa)    
Predicted Functional Partners:
Noca_2215
PFAM: regulatory protein, ArsR; KEGG: nfa:nfa26300 putative transcriptional regulator.
     
 0.790
Noca_2214
KEGG: pfl:PFL_2399 hypothetical protein.
       0.568
Noca_1617
TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: afu:AF2137 hypothetical protein.
 
 
 0.433
Noca_1217
KEGG: rha:RHA1_ro02410 hypothetical protein.
  
 0.420
Noca_4376
KEGG: tfu:Tfu_2504 putative integral membrane protein.
  
 0.420
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.