STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2235PFAM: transposase IS116/IS110/IS902 family protein; KEGG: rha:RHA1_ro01400 probable transposase. (444 aa)    
Predicted Functional Partners:
Noca_4652
PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: mlo:mll9045 transposase.
  
     0.673
Noca_1720
PFAM: transposase IS116/IS110/IS902 family protein; KEGG: chy:CHY_2508 ISChy2, transposase.
  
     0.578
Noca_4525
PFAM: transposase IS116/IS110/IS902 family protein; KEGG: chy:CHY_2508 ISChy2, transposase.
  
     0.578
Noca_2234
Hypothetical protein.
       0.423
Noca_0630
Transposase, mutator type; Required for the transposition of the insertion element.
 
     0.403
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.