STRINGSTRING
Noca_2244 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2244" - Peptidase M23B in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2244Peptidase M23B (1048 aa)    
Predicted Functional Partners:
Noca_2243
ATP-binding protein (512 aa)
              0.759
Noca_2242
Hypothetical protein (501 aa)
              0.759
Noca_3345
Peptidase M23B (188 aa)
   
          0.678
Noca_2245
Hypothetical protein (200 aa)
              0.628
Noca_4676
Glycosyl transferase family protein (778 aa)
   
          0.582
Noca_2241
Hypothetical protein (656 aa)
              0.582
Noca_2240
Hypothetical protein (258 aa)
              0.582
Noca_2239
Hypothetical protein (288 aa)
              0.582
Noca_2238
Hypothetical protein (97 aa)
              0.582
Noca_0326
Glycosyl transferase family protein (807 aa)
   
          0.569
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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