STRINGSTRING
Noca_2265 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2265" - Phage integrase family protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2265Phage integrase family protein (411 aa)    
Predicted Functional Partners:
Noca_2264
Phage integrase family protein (797 aa)
 
          0.966
Noca_2264
Phage integrase family protein (797 aa)
 
          0.781
Noca_2268
DNA protecting protein DprA (349 aa)
         
  0.760
Noca_2178
Phage integrase family protein (303 aa)
 
 
 
  0.708
Noca_0602
Phage integrase family protein (412 aa)
   
          0.678
Noca_2266
Hypothetical protein (313 aa)
              0.637
Noca_2267
Hypothetical protein (54 aa)
              0.610
Noca_1106
Restriction modification system DNA specificity subunit (161 aa)
   
   
  0.569
Noca_1105
Restriction modification system DNA specificity subunit (225 aa)
   
   
  0.569
Noca_3309
Peroxiredoxins-like protein (192 aa)
   
          0.568
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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