STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2265PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: fra:Francci3_3532 phage integrase; Belongs to the 'phage' integrase family. (411 aa)    
Predicted Functional Partners:
Noca_2264
PFAM: phage integrase family protein; KEGG: rha:RHA1_ro10276 possible DNA integrase/recombinase.
 
     0.928
Noca_2973
PFAM: phage integrase family protein; KEGG: rha:RHA1_ro10276 possible DNA integrase/recombinase.
 
     0.695
Noca_0602
PFAM: phage integrase family protein; KEGG: eba:p2A229 putative integrase.
  
     0.613
Noca_0600
PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: eba:p2A227 putative integrase; Belongs to the 'phage' integrase family.
  
     0.567
Noca_2178
PFAM: phage integrase family protein; KEGG: pfo:Pfl_1025 tyrosine recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.561
Noca_2268
TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: sma:SAV2631 putative DNA processing Smf-family protein.
     
 0.553
Noca_2266
KEGG: tfu:Tfu_2217 hypothetical protein.
       0.545
Noca_2293
PFAM: phage integrase family protein; KEGG: sco:SCO5633 traSA:integrase fusion protein; Belongs to the 'phage' integrase family.
 
 
 
 0.530
Noca_2267
Hypothetical protein.
       0.521
Noca_1590
PFAM: phage integrase family protein; KEGG: fal:FRAAL6356 putative tyrosine recombinase XerD.
  
     0.517
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.