STRINGSTRING
Noca_2291 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2291" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2291Hypothetical protein (449 aa)    
Predicted Functional Partners:
Noca_2292
Hypothetical protein (116 aa)
              0.662
Noca_2684
Hypothetical protein (245 aa)
 
          0.534
Noca_2332
Regulatory protein TetR (189 aa)
   
          0.514
Noca_0097
Regulator of polyketide synthase expression-like (524 aa)
   
          0.500
Noca_1402
Putative glycosyltransferase (659 aa)
   
          0.460
Noca_2290
Hypothetical protein (180 aa)
              0.431
Noca_2905
Hypothetical protein (238 aa)
   
          0.423
Noca_2293
Phage integrase family protein (395 aa)
              0.415
Noca_3946
Hypothetical protein (175 aa)
   
          0.412
Noca_4606
N-acetyltransferase GCN5 (308 aa)
   
          0.405
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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