STRINGSTRING
Noca_2296 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2296" - RDD domain-containing protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2296RDD domain-containing protein (150 aa)    
Predicted Functional Partners:
Noca_2297
Hypothetical protein (300 aa)
              0.792
Noca_3469
Hypothetical protein (126 aa)
   
          0.730
Noca_4682
Hypothetical protein (735 aa)
   
          0.686
Noca_0999
Hypothetical protein (135 aa)
   
          0.640
Noca_2295
L-glutamine synthetase (474 aa)
              0.610
Noca_2266
Hypothetical protein (313 aa)
   
          0.591
Noca_4543
Hypothetical protein (136 aa)
   
          0.572
Noca_3139
Hypothetical protein; Part of cytochrome c oxidase, its function is unknown (132 aa)
   
          0.563
Noca_3136
Rieske (2Fe-2S) domain-containing protein (368 aa)
   
          0.558
Noca_4011
Hypothetical protein (401 aa)
   
          0.533
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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