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Noca_2302 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2302" - NAD-dependent epimerase/dehydratase in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2302NAD-dependent epimerase/dehydratase (298 aa)    
Predicted Functional Partners:
Noca_2303
2-oxoglutarate dehydrogenase E2 component (597 aa)
   
        0.880
Noca_2304
Dihydrolipoamide dehydrogenase (459 aa)
   
        0.835
Noca_1996
Redoxin domain-containing protein (154 aa)
   
        0.692
Noca_1326
Redoxin domain-containing protein (163 aa)
   
        0.692
Noca_2305
Hypothetical protein (149 aa)
              0.641
Noca_2889
Protoporphyrin IX magnesium-chelatase (653 aa)
 
        0.601
Noca_0778
Deoxyribodipyrimidine photo-lyase type I (453 aa)
 
   
  0.601
rpmI
50S ribosomal protein L35 (64 aa)
     
        0.568
Noca_3037
DsrC family protein (104 aa)
   
          0.557
atpG
ATP synthase F1 subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex (303 aa)
   
        0.513
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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