STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2337PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rha:RHA1_ro01206 hypothetical protein. (440 aa)    
Predicted Functional Partners:
Noca_2340
Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage.
 
 
   0.816
Noca_2339
PFAM: major facilitator superfamily MFS_1; KEGG: nfa:nfa33380 putative transporter.
     
 0.788
Noca_2338
KEGG: sma:SAV2495 hypothetical protein.
       0.787
Noca_3941
PFAM: Forkhead-associated protein; KEGG: lxx:Lxx04220 hypothetical protein.
  
    0.547
nuoI
NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
  
 0.545
Noca_2336
KEGG: rha:RHA1_ro05054 hypothetical protein.
  
    0.542
Noca_2335
PFAM: Endoribonuclease L-PSP; KEGG: fra:Francci3_4440 endoribonuclease L-PSP.
  
  
 0.520
Noca_2384
KEGG: rha:RHA1_ro05202 hypothetical protein.
  
     0.510
recA
RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
     
 0.478
Noca_3940
PFAM: RDD domain containing protein; KEGG: lxx:Lxx12090 hypothetical protein.
  
    0.474
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.