STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2350KEGG: sma:SAV2128 hypothetical protein. (65 aa)    
Predicted Functional Partners:
Noca_2351
PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: sco:SCO6102 putative nitrite/sulphite reductase.
  
  
 0.964
Noca_2349
Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
  
  
 0.950
Noca_3794
Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
  
  
 0.791
Noca_3629
KEGG: bcl:ABC0432 O-acetylhomoserine (thiol)-lyase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes.
   
    0.741
Noca_3126
KEGG: sma:SAV6061 hypothetical protein.
  
     0.665
Noca_2348
PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: sco:SCO6093 secreted protein.
     
 0.629
Noca_3123
KEGG: sma:SAV6064 hypothetical protein.
  
     0.606
Noca_4207
KEGG: tfu:Tfu_0419 sulfate adenylyltransferase, small subunit; TIGRFAM: sulfate adenylyltransferase, small subunit; PFAM: phosphoadenosine phosphosulfate reductase.
  
  
 0.592
Noca_2368
PFAM: sporulation and cell division protein SsgA; KEGG: fra:Francci3_1359 sporulation and cell division protein SsgA.
  
     0.588
Noca_2575
KEGG: sma:SAV6479 hypothetical protein.
  
     0.574
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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