STRINGSTRING
Noca_2355 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2355" - TrkA domain-containing protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2355TrkA domain-containing protein (366 aa)    
Predicted Functional Partners:
Noca_2354
Ribonuclease BN (327 aa)
              0.843
Noca_1514
NUDIX hydrolase (307 aa)
 
        0.798
Noca_0880
Aldo/keto reductase (347 aa)
   
    0.671
Noca_2353
acyl-CoA dehydrogenase domain-containing protein (557 aa)
   
        0.653
Noca_2356
PAS sensor protein (668 aa)
         
  0.628
Noca_3524
Aldo/keto reductase (334 aa)
     
    0.601
Noca_3154
Aldo/keto reductase (335 aa)
     
    0.601
Noca_2622
Aldo/keto reductase (315 aa)
     
    0.601
Noca_1416
Aldo/keto reductase (309 aa)
     
    0.601
Noca_0658
Aldo/keto reductase (288 aa)
     
    0.601
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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