STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2372PFAM: histidine triad (HIT) protein; KEGG: nfa:nfa37110 hypothetical protein. (174 aa)    
Predicted Functional Partners:
cysC
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
 
  0.908
Noca_4207
KEGG: tfu:Tfu_0419 sulfate adenylyltransferase, small subunit; TIGRFAM: sulfate adenylyltransferase, small subunit; PFAM: phosphoadenosine phosphosulfate reductase.
    
  0.902
Noca_4208
Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
    
  0.900
Noca_2373
PFAM: inositol monophosphatase; KEGG: cef:CE0810 hypothetical protein.
       0.779
Noca_2380
CDP-diacylglycerol inositol 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: sma:SAV6826 putative membrane transferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
 0.707
thrS
Ser-tRNA(Thr) hydrolase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). Also edits incorrectly charged L-seryl-tRNA(Thr).
     
 0.585
Noca_2371
PFAM: GCN5-related N-acetyltransferase; KEGG: ccr:CC0816 acetyltransferase, GNAT family.
  
    0.576
Noca_2374
KEGG: rha:RHA1_ro07061 hypothetical protein.
  
    0.542
Noca_2718
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: tfu:Tfu_1393 putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
 0.535
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
 
 
  0.509
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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