STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2374KEGG: rha:RHA1_ro07061 hypothetical protein. (206 aa)    
Predicted Functional Partners:
Noca_2122
PFAM: protein of unknown function DUF1326; KEGG: rde:RD1_2286 hypothetical protein.
  
     0.563
Noca_3208
KEGG: mmc:Mmcs_2752 hypothetical protein.
  
     0.545
Noca_2372
PFAM: histidine triad (HIT) protein; KEGG: nfa:nfa37110 hypothetical protein.
  
    0.542
Noca_2373
PFAM: inositol monophosphatase; KEGG: cef:CE0810 hypothetical protein.
       0.535
Noca_1723
KEGG: mmc:Mmcs_4829 hypothetical protein.
  
     0.527
Noca_4266
KEGG: mmc:Mmcs_0096 hypothetical protein.
  
     0.523
Noca_4152
KEGG: mpa:MAP2481c hypothetical protein.
  
     0.490
Noca_2123
KEGG: bca:BCE_A0200 hypothetical protein.
  
     0.489
Noca_3549
KEGG: sco:SCO5108 integral membrane protein.
  
     0.484
Noca_1721
KEGG: mmc:Mmcs_1430 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member-like protein.
 
     0.439
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.