STRINGSTRING
Noca_2379 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2379" - ROK family protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2379ROK family protein (395 aa)    
Predicted Functional Partners:
Noca_2378
Inner-membrane translocator (419 aa)
 
     
  0.929
Noca_2377
ABC transporter-like protein (252 aa)
 
     
  0.927
Noca_4484
N-acetylglucosamine 6-phosphate deacetylase (318 aa)
 
   
  0.798
Noca_2376
Periplasmic binding protein/LacI transcriptional regulator (376 aa)
 
     
  0.792
Noca_2380
CDP-diacylglycerol inositol 3-phosphatidyltransferase (206 aa)
              0.754
pdxT
SNO glutamine amidotransferase; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5’-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS (201 aa)
              0.752
pdxS
Pyridoxal biosynthesis lyase PdxS; Catalyzes the formation of pyridoxal 5’-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively (309 aa)
              0.752
Noca_2383
Hypothetical protein (259 aa)
              0.748
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta- semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) (298 aa)
   
 
  0.708
Noca_0085
Dihydrodipicolinate synthetase (310 aa)
   
 
  0.708
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (8%) [HD]