STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2384KEGG: rha:RHA1_ro05202 hypothetical protein. (331 aa)    
Predicted Functional Partners:
Noca_3941
PFAM: Forkhead-associated protein; KEGG: lxx:Lxx04220 hypothetical protein.
  
     0.632
Noca_3940
PFAM: RDD domain containing protein; KEGG: lxx:Lxx12090 hypothetical protein.
  
     0.573
Noca_4224
KEGG: mmc:Mmcs_0947 hypothetical protein.
  
     0.572
Noca_2535
KEGG: mpa:MAP2795 hypothetical protein.
  
     0.540
Noca_0795
KEGG: sco:SCO3177 hypothetical protein.
  
     0.539
Noca_2834
KEGG: mmc:Mmcs_0408 putative anti-sigma regulatory factor, serine/threonine protein kinase.
  
     0.523
Noca_2337
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rha:RHA1_ro01206 hypothetical protein.
  
     0.510
Noca_0299
KEGG: pac:PPA2178 hypothetical protein.
  
     0.502
Noca_2832
Cellulose synthase (UDP-forming); PFAM: glycosyl transferase, family 2; KEGG: rha:RHA1_ro03574 probable cellulose synthase catalytic subunit.
  
     0.494
Noca_4682
KEGG: sco:SCO3895 hypothetical protein.
  
     0.491
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.