STRINGSTRING
Noca_2399 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2399" - Binding-protein-dependent transport system inner membrane protein in Nocardioides sp. JS614
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2399Binding-protein-dependent transport system inner membrane protein (336 aa)    
Predicted Functional Partners:
Noca_2402
Oligopeptide/dipeptide ABC transporter ATPase (347 aa)
  0.984
Noca_2401
Binding-protein-dependent transport systems inner membrane component (338 aa)
  0.981
Noca_2403
Oligopeptide/dipeptide ABC transporter ATPase (425 aa)
  0.977
Noca_4091
Oligopeptide/dipeptide ABC transporter ATPase (339 aa)
  0.974
Noca_4093
Binding-protein-dependent transport systems inner membrane component (321 aa)
  0.967
Noca_4090
Oligopeptide/dipeptide ABC transporter ATPase (358 aa)
  0.964
Noca_2400
Extracellular solute-binding protein (599 aa)
 
          0.944
Noca_4082
Extracellular solute-binding protein (526 aa)
  0.941
Noca_0793
Molybdopterin adenylyltransferase (158 aa)
     
      0.828
aspS
aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps- aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn) (590 aa)
         
  0.523
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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