STRINGSTRING
Noca_2401 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2401" - Binding-protein-dependent transport systems inner membrane component in Nocardioides sp. JS614
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2401Binding-protein-dependent transport systems inner membrane component (338 aa)    
Predicted Functional Partners:
Noca_2402
Oligopeptide/dipeptide ABC transporter ATPase (347 aa)
  0.994
Noca_2403
Oligopeptide/dipeptide ABC transporter ATPase (425 aa)
  0.993
Noca_2399
Binding-protein-dependent transport system inner membrane protein (336 aa)
  0.981
Noca_4092
Binding-protein-dependent transport system inner membrane protein (346 aa)
  0.972
Noca_4091
Oligopeptide/dipeptide ABC transporter ATPase (339 aa)
  0.964
Noca_4090
Oligopeptide/dipeptide ABC transporter ATPase (358 aa)
  0.961
Noca_4082
Extracellular solute-binding protein (526 aa)
  0.940
Noca_2400
Extracellular solute-binding protein (599 aa)
 
          0.916
Noca_2404
Recombination factor protein RarA (456 aa)
   
   
  0.773
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (896 aa)
         
  0.725
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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