STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
argFOrnithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. (334 aa)    
Predicted Functional Partners:
Noca_2426
KEGG: pau:PA14_68350 carbamate kinase; TIGRFAM: carbamate kinase; PFAM: aspartate/glutamate/uridylate kinase; Belongs to the carbamate kinase family.
 
 
 0.997
arcA-2
KEGG: pau:PA14_68330 arginine deiminase; TIGRFAM: arginine deiminase; PFAM: amidinotransferase.
 
 
 0.996
Noca_1504
Carbamate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: mta:Moth_1948 carbamate kinase; Belongs to the carbamate kinase family.
 
 0.991
arcA
Arginine deiminase; PFAM: amidinotransferase; KEGG: rha:RHA1_ro05654 arginine deiminase.
 
 
 0.990
argJ
N-acetylglutamate synthase / glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.
 
 
 0.984
argG
PFAM: argininosuccinate synthase; KEGG: sco:SCO7036 argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily.
  
 
 0.984
carB
TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain, oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; RimK domain protein ATP-grasp; KEGG: sco:SCO1483 carbamoylphosphate synthetase large chain; Belongs to the CarB family.
 
 
 0.958
carA
KEGG: sco:SCO1484 carbamoyl-phosphate synthase, pyrimidine-specific, small chain; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase, small chain; Belongs to the CarA family.
  
 
 0.939
Noca_3363
Acetylornithine deacetylase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: sru:SRU_2799 acetylornithine deacetylase.
  
 
 0.913
Noca_4506
TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bce:BC2248 acetylornithine deacetylase.
  
 
 0.913
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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