rpoZ protein (Nocardioides sp. JS614) - STRING interaction network

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rpoZ

DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (110 aa)

Predicted Functional Partners:

rpoA

0.998

rpoC

0.996

rpoB

0.994

gmk

0.976

Noca_2392

0.954

pyrG

0.937

dcd

0.928

pnp

0.925

ndk

0.917

Noca_3020

0.913

Your Current Organism:

Nocardioides sp. JS614

NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Noca_2392	Noca_3020	Noca_2392	Noca_3020	RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3’-diphosphate 5-’ diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance	Pyruvate kinase	0.916
Noca_2392	gmk	Noca_2392	Noca_2436	RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3’-diphosphate 5-’ diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance	Guanylate kinase; Essential for recycling GMP and indirectly, cGMP	0.493
Noca_2392	ndk	Noca_2392	Noca_3466	RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3’-diphosphate 5-’ diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance	Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate	0.954
Noca_2392	pnp	Noca_2392	Noca_3177	RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3’-diphosphate 5-’ diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance	Polynucleotide phosphorylase/polyadenylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3’- to 5’-direction	0.430
Noca_2392	rpoA	Noca_2392	Noca_3875	RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3’-diphosphate 5-’ diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	0.917
Noca_2392	rpoB	Noca_2392	Noca_0711	RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3’-diphosphate 5-’ diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	0.926
Noca_2392	rpoC	Noca_2392	Noca_0712	RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3’-diphosphate 5-’ diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance	DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	0.944
Noca_2392	rpoZ	Noca_2392	Noca_2437	RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3’-diphosphate 5-’ diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits	0.954
Noca_3020	Noca_2392	Noca_3020	Noca_2392	Pyruvate kinase	RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3’-diphosphate 5-’ diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance	0.916
Noca_3020	gmk	Noca_3020	Noca_2436	Pyruvate kinase	Guanylate kinase; Essential for recycling GMP and indirectly, cGMP	0.944
Noca_3020	ndk	Noca_3020	Noca_3466	Pyruvate kinase	Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate	0.922
Noca_3020	pnp	Noca_3020	Noca_3177	Pyruvate kinase	Polynucleotide phosphorylase/polyadenylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3’- to 5’-direction	0.938
Noca_3020	pyrG	Noca_3020	Noca_2485	Pyruvate kinase	CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen	0.426
Noca_3020	rpoA	Noca_3020	Noca_3875	Pyruvate kinase	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	0.945
Noca_3020	rpoB	Noca_3020	Noca_0711	Pyruvate kinase	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	0.936
Noca_3020	rpoC	Noca_3020	Noca_0712	Pyruvate kinase	DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	0.945
Noca_3020	rpoZ	Noca_3020	Noca_2437	Pyruvate kinase	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits	0.913
dcd	ndk	Noca_4412	Noca_3466	Deoxycytidine triphosphate deaminase	Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate	0.961
dcd	rpoA	Noca_4412	Noca_3875	Deoxycytidine triphosphate deaminase	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	0.900
dcd	rpoB	Noca_4412	Noca_0711	Deoxycytidine triphosphate deaminase	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	0.903

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