STRINGSTRING
Noca_2463 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2463" - Alpha-glucosidase in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2463Alpha-glucosidase (768 aa)    
Predicted Functional Partners:
Noca_1811
Alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (862 aa)
   
 
  0.947
Noca_2464
ATPase domain-containing protein (342 aa)
 
          0.876
Noca_2462
tRNA/rRNA methyltransferase SpoU (237 aa)
 
          0.863
rplT
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (130 aa)
              0.654
Noca_4688
Thioredoxin (108 aa)
     
    0.643
Noca_2203
Redoxin domain-containing protein (203 aa)
     
    0.643
Noca_2202
Redoxin domain-containing protein (194 aa)
     
    0.643
Noca_2076
Redoxin domain-containing protein (169 aa)
     
    0.643
Noca_0501
Redoxin domain-containing protein (200 aa)
     
    0.643
Noca_0341
Redoxin domain-containing protein (203 aa)
     
    0.643
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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