STRINGSTRING
Noca_2490 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2490" - DEAD/DEAH box helicase in Nocardioides sp. JS614
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2490DEAD/DEAH box helicase (865 aa)    
Predicted Functional Partners:
Noca_3676
3’-5’ exonuclease (442 aa)
   
  0.965
Noca_2989
30S ribosomal protein S1 (490 aa)
   
  0.910
xerD
Tyrosine recombinase XerD (318 aa)
              0.859
Noca_2488
L-alanine dehydrogenase (371 aa)
              0.859
rph
Ribonuclease PH; Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates (242 aa)
     
  0.833
Noca_3692
ATP-dependent helicase HrpA (1282 aa)
 
  0.798
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1166 aa)
   
    0.787
rpoC
DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1290 aa)
   
    0.776
Noca_2487
Hypothetical protein (436 aa)
 
          0.736
Noca_4567
DEAD/DEAH box helicase domain-containing protein (507 aa)
   
  0.707
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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