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der protein (Nocardioides sp. JS614) - STRING interaction network
"der" - GTP-binding protein EngA in Nocardioides sp. JS614
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
derGTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis (461 aa)    
Predicted Functional Partners:
cmk
Cytidylate kinase (243 aa)
   
  0.976
rplA
50S ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release (259 aa)
   
 
  0.970
rplF
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center (179 aa)
 
 
  0.952
rplN
50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome (122 aa)
     
 
  0.950
Noca_2497
Ribosomal large subunit pseudouridine synthase B (251 aa)
 
   
  0.925
Noca_2502
Phospholipid/glycerol acyltransferase (254 aa)
   
   
  0.915
rplX
50S ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (123 aa)
   
 
  0.886
era
GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism (313 aa)
 
   
  0.871
Noca_2500
Prephenate dehydrogenase (361 aa)
 
          0.865
Noca_2499
Chorismate mutase (128 aa)
              0.830
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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