STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2504PFAM: protein of unknown function DUF124; KEGG: rxy:Rxyl_3200 protein of unknown function DUF124. (243 aa)    
Predicted Functional Partners:
Noca_2505
KEGG: mmu:233210 proline rich 12.
       0.547
Noca_2606
KEGG: rha:RHA1_ro05489 hypothetical protein.
  
     0.520
Noca_1893
PFAM: MOSC domain containing protein; KEGG: sma:SAV4995 hypothetical protein.
 
     0.454
Noca_2506
PFAM: protein of unknown function DUF81; KEGG: rxy:Rxyl_0506 protein of unknown function DUF81.
       0.446
Noca_3960
PFAM: protein of unknown function DUF214; KEGG: fal:FRAAL2863 putative ABC transport system integral membrane protein.
  
     0.403
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.