STRINGSTRING
Noca_2533 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2533" - Protein translocase subunit secG in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2533Protein translocase subunit secG (76 aa)    
Predicted Functional Partners:
Noca_2534
Electron transport protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters (119 aa)
 
          0.891
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) (264 aa)
              0.822
pgk
Phosphoglycerate kinase (399 aa)
              0.691
Noca_2530
Glyceraldehyde-3-phosphate dehydrogenase (331 aa)
              0.691
whiA
Hypothetical protein; May be required for sporulation (328 aa)
              0.586
Noca_2527
Hypothetical protein; Displays ATPase and GTPase activities (301 aa)
              0.545
Noca_0877
Hypothetical protein (90 aa)
   
          0.503
uvrC
Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5’ and 3’ sides of the lesion. The N-terminal half is responsible for the 3’ incision and the C-terminal half is responsible for the 5’ incision (666 aa)
              0.486
Noca_3675
Hypothetical protein (209 aa)
   
          0.471
Noca_3265
Hypothetical protein (122 aa)
   
          0.448
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (11%) [HD]