STRINGSTRING
Noca_2547 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2547" - PA-phosphatase-like phosphoesterase in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2547PA-phosphatase-like phosphoesterase (251 aa)    
Predicted Functional Partners:
Noca_2546
Hypothetical protein (222 aa)
              0.859
Noca_2544
ABC transporter (265 aa)
 
          0.758
Noca_2545
ABC transporter-like protein (315 aa)
 
          0.752
Noca_2543
Cytochrome oxidase assembly (305 aa)
              0.712
Noca_3929
Integral membrane protein (78 aa)
   
          0.704
Noca_3931
Major facilitator transporter (449 aa)
   
          0.688
Noca_1776
Integral membrane protein (603 aa)
   
          0.648
Noca_2548
Hypothetical protein (286 aa)
              0.563
Noca_1468
ErfK/YbiS/YcfS/YnhG family protein (234 aa)
   
          0.537
Noca_0162
SecC motif-containing protein (312 aa)
   
          0.526
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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