STRINGSTRING
Noca_2549 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2549" - Transcriptional regulator in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2549Transcriptional regulator (240 aa)    
Predicted Functional Partners:
Noca_2550
FeS assembly protein SufB (472 aa)
         
  0.917
Noca_2554
SufS subfamily cysteine desulfurase (428 aa)
   
   
  0.786
Noca_2553
FeS assembly ATPase SufC (253 aa)
   
   
  0.772
Noca_2556
Hypothetical protein (122 aa)
   
   
  0.755
Noca_2551
FeS assembly protein SufD (401 aa)
         
  0.754
Noca_2555
NifU family SUF system FeS assembly protein (150 aa)
   
        0.752
Noca_2552
Rieske (2Fe-2S) domain-containing protein (116 aa)
              0.749
Noca_2544
ABC transporter (265 aa)
 
          0.655
Noca_2545
ABC transporter-like protein (315 aa)
 
          0.648
Noca_2548
Hypothetical protein (286 aa)
              0.611
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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