STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2571TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: lxx:Lxx11740 3-oxoacyl-[acyl-carrier protein] reductase. (239 aa)    
Predicted Functional Partners:
Noca_1987
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 0.981
Noca_4118
PFAM: beta-ketoacyl synthase; KEGG: cya:CYA_2873 3-oxoacyl-[acyl-carrier-protein] synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 0.978
Noca_2572
Enoyl-[acyl-carrier-protein] reductase (NADH); PFAM: short-chain dehydrogenase/reductase SDR; KEGG: fra:Francci3_1894 short-chain dehydrogenase/reductase SDR.
 
  
 0.888
Noca_1990
KEGG: tfu:Tfu_1973 acyl-carrier-protein S-malonyltransferase.
 
 
 0.830
Noca_2573
PFAM: Phosphoglycerate mutase; KEGG: tfu:Tfu_0135 hypothetical protein.
       0.782
Noca_3816
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dar:Daro_1357 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.760
fabH
3-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.
 
  
 0.746
Noca_2781
PFAM: MaoC domain protein dehydratase; KEGG: rha:RHA1_ro04531 2-enoyl acyl-CoA hydratase.
 
 0.658
Noca_2570
PFAM: protein of unknown function DUF1458; KEGG: sco:SCO0915 hypothetical protein.
       0.538
Noca_4502
PFAM: carboxyl transferase; Enoyl-CoA hydratase/isomerase; KEGG: rha:RHA1_ro02935 acetyl-CoA carboxylase carboxyl transferase subunit.
 
  
 0.505
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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