STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2575KEGG: sma:SAV6479 hypothetical protein. (245 aa)    
Predicted Functional Partners:
Noca_2574
KEGG: sco:SCO1808 putative phosphoserine phosphatase; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: amino acid-binding ACT domain protein; Haloacid dehalogenase domain protein hydrolase; Haloacid dehalogenase domain protein hydrolase, type 3.
       0.813
Noca_2577
PFAM: protein of unknown function DUF107; KEGG: tfu:Tfu_2226 putative integral membrane protein.
     
 0.744
Noca_4019
PFAM: metallophosphoesterase; KEGG: swo:Swol_2226 hypothetical protein.
  
     0.697
Noca_1406
KEGG: sma:SAV5035 hypothetical protein.
  
     0.688
Noca_2576
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nfa:nfa42910 putative ABC transporter ATP-binding protein.
       0.686
Noca_0906
KEGG: sma:SAV2206 hypothetical protein.
  
     0.683
Noca_4232
KEGG: fal:FRAAL0941 putative thioredoxin.
  
     0.656
Noca_2368
PFAM: sporulation and cell division protein SsgA; KEGG: fra:Francci3_1359 sporulation and cell division protein SsgA.
  
     0.647
Noca_1468
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: sco:SCO4430 secreted protein.
  
     0.628
Noca_3945
KEGG: sma:SAV3911 hypothetical protein.
  
     0.626
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.