STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2583PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: cya:CYA_0909 glycerophosphoryl diester phosphodiesterase family protein. (221 aa)    
Predicted Functional Partners:
Noca_0161
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: sma:SAV4224 putative phosphodiesterase.
     
  0.900
Noca_2671
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: sma:SAV6927 putative glycerophosphoryl diester phosphodiesterase.
     
  0.900
Noca_4033
PFAM: Ethanolamine ammonia-lyase light chain; KEGG: dsy:DSY4961 hypothetical protein.
     
  0.900
Noca_4034
Ethanolamine ammonia-lyase heavy chain; PFAM: Ethanolamine ammonia lyase large subunit; KEGG: ctc:CTC02176 ethanolamine ammonia-lyase heavy chain.
     
  0.900
Noca_4035
Reactivating factor of Adenosylcobalamin-dependent ethanolamine ammonia lyase; PFAM: Ethanolamine utilisation EutA; KEGG: stm:STM2459 CPPZ-55 prophage; chaperonin in ethanolamine utilization.
     
  0.900
Noca_2582
KEGG: rha:RHA1_ro06611 hypothetical protein.
     
 0.790
Noca_2584
Peptidase C26; PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: mle:ML1573 possible amidotransferase.
       0.732
Noca_2585
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: sma:SAV6727 short chain dehydrogenase.
     
 0.726
Noca_1328
KEGG: sma:SAV3606 putative membrane protein.
  
     0.611
Noca_2586
PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_2059 betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.595
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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