STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2589Amino acid/polyamine/organocation transporter, APC superfamily; PFAM: amino acid permease-associated region; KEGG: sco:SCO4097 amino acid/metabolite permease; TC 2.A.3. (527 aa)    
Predicted Functional Partners:
Noca_2590
PFAM: Choline/ethanolamine kinase; aminoglycoside phosphotransferase; KEGG: mlo:mll5367 hypothetical protein.
 
 
 0.928
Noca_2591
PFAM: FAD dependent oxidoreductase; glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein, C-terminal barrel; KEGG: bxe:Bxe_B1666 dehydrogenase; Belongs to the GcvT family.
 
  
 0.835
Noca_2587
PFAM: glutamine synthetase, catalytic region; KEGG: rxy:Rxyl_3196 glutamate--ammonia ligase.
 
  
 0.714
Noca_2586
PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_2059 betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
  
 0.620
Noca_2588
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; Helix-turn-helix, type 11 domain protein; KEGG: sma:SAV6724 GntR-family transcriptional regulator.
 
   
 0.619
Noca_2585
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: sma:SAV6727 short chain dehydrogenase.
 
 
 
 0.607
Noca_2584
Peptidase C26; PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: mle:ML1573 possible amidotransferase.
 
  
 0.548
Noca_2592
KEGG: mmc:Mmcs_4977 hypothetical protein.
       0.543
Noca_0197
PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: sco:SCO2226 bi-functional protein (secreted alpha-amylase/dextrinase).
   
 0.502
Noca_0775
PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: tfu:Tfu_0833 alpha amylase, catalytic subdomain.
   
 0.502
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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